|
Biological processes identified by MAPPFinder based on gene expression |
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| GOID |
GO Name |
Number of changed genes |
Number of measured genes |
Number of genes in GO |
Percentage changed genes |
Percentage present genes |
Z score |
|
|
|||||||
| 7596 |
Blood coagulation |
8 |
26 |
74 |
30.77 |
35.14 |
3.56 |
| 6954 |
Inflammatory response |
13 |
44 |
168 |
29.55 |
26.19 |
4.35 |
| 8285 |
Negative regulation of cell proliferation |
8 |
32 |
129 |
25.00 |
24.81 |
2.88 |
| 6935 |
Chemotaxis |
7 |
31 |
107 |
22.58 |
28.97 |
2.28 |
| 6955 |
Immune response |
13 |
61 |
569 |
21.31 |
10.72 |
4.17 |
|
The bioprocesses affected by mechanical stretch were identified using MAPPFinder [12] software, designed by the BayGenomics PGA group for dynamic linkage of gene expression data to the Gene Ontology (GO; http://www.geneontology.org hierarchy. Data were filtered by number of changed genes (> 5) and Z score (> 2.0) and sorted by percentage changed genes. | |||||||
Grigoryev et al. Critical Care 2004 8:440 doi:10.1186/cc2901 |
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